The video below shows the process of How to edit the position of the search box (click the button on the bottom right of the video to expand the view). You can also follow the screen shots and steps below this.
2) Click on the sidebars button on the left hand side of the Toolkit.
3) Click on "new sidebar" from the top menu bar.
4) Give your search box a title, such as "Search Box " and select 'Search box' from the drop down menu and click create sidebar
5) If you want to add any other explaining text, type it in the text editor and click Save changes
6) The page will reload displaying a list of your quick links in the order they display on your website. Use the up / down arrow to position the new search box in the sidebar column.
7) Click publish next the Search Box title to display the new search box on your website.